Publications

HomeHome.html
Publications
ResearchResearch.html
Prof. UEDAProf._UEDA.html
MembersMembers.html
FacilitiesFacilities.html
Lab lifeLab_life/Lab_life.html
LinksLinks.html

>> Presentationsはこちら

 

2019


  1. Y. Takaoka, K. Nagumo, I. N. Azizah, S. Oura, M. Iwahashi, N. Kato, M. Ueda, A comprehensive in vitro fluorescence anisotropy assay system for screening ligands of the jasmonate COI1–JAZ co-receptor in plants, J. Biol. Chem., 294, 5074-5081 (2019). | DOI:10.1074/jbc.RA118.006639


  1. M. Ueda, Y. Ishimaru, Y. Takeuchi, Y. Muraoka, Plant nyctinasty-Who will decode the “Rosetta Stone”? (Tansley insights), New Phytologist, in press (2019). | DOI:10.1111/nph.15717


  1. 上田 実、「天然物立体異性体を用いる植物ホルモン活性の化学チューニング(ミニレビュー)」、日本農薬学会誌 (2019)


  1. 上田 実、生物に学ぶ新しい化学的活性制御:植物ホルモンの標的選択性チューニング、杉本直己、民秋均、深瀬浩一編著、「CSJカレントレビュー 生体分子反応を制御する:制御分子、方法、反応場」(2019) .


2018


  1. Y. Takaoka, M. Iwahashi, A. Chini, H. Saito, Y. Ishimaru, S. Egoshi, N. Kato, M. Tanaka, K. Bashir, M. Seki, R. Solano, M. Ueda, A rationally designed JAZ subtype-selective agonist of jasmonate perception, Nature Commun., 9, 3654 (2018). | DOI:10.1038/s41467-018-06135-y.


  1. T. Oikawa, Y. Ishimaru, S. Munemasa, Y. Takeuchi, K. Washiyama, S. Hamamoto, N. Yoshikawa, Y. Murata, N. Uozumi, M. Ueda, Ion channels regulate nyctinastic leaf opening in Samanea saman, Current Biology, 28, 2230-2238 (2018). | DOI:10.1016/j.cub.2018.05.042


  1. Y. Ishimaru, K. Hayashi, T. Suzuki, H. Fukaki, J. Prusinska, C. Meester, M. Quareshy, S. Egoshi, H. Matsuura, K. Takahashi, N. Kato, E. Kombrink, R. M. Napier, K. Hayashi, M. Ueda, Jasmonic acid preferentially inhibits auxin-induced lateral root in a COI1-independent manner, Plant Physiol., 177, 1704-1716 (2018). | DOI:10.1104/pp.18.00357


  1. M. Ueda, K. Hayashi, S. Egoshi, Y. Ishimaru, Y. Takaoka, K. Dodo, and M. Sodeoka, The alkyne-tag Raman imaging of coronatine, a plant pathogen virulence factor, in Commelina communis and the possible mode of action, Org. Biomol. Chem., 16, 3348-3352 (2018) | DOI: 10.1039/C8OB00097B, Selected as a front cover picture.


  1. S. Tamura‡, M. Okada‡, S. Kato, Y. Shinoda, N. Shioda, K. Fukunaga, K. Tei-Ui, M. Ueda, (‡co-first authors), Ouabagenin is a naturally occurring LXR ligand without causing hepatic steatosis, Sci. Rep., 8:2305 (2018) | DOI:10.1038/s41598-018-20663-z.


  1. S. Saito, S. Hamamoto, K. Moriya, A. Matsuura, Y. Sato, J. Muto, H. Noguchi, S. Yamauchi, Y. Tozawa, M. Ueda, K. Hashimoto, P. Köster, Q. Dong, K. Held, J. Kudla, T. Utsumi, and N. Uozumi, Dual Lipid Modification is Prevalent in Specific Kinase Families and Required for SLAC1 Activation, New Phytologist., 218, 1504-1521 (2018) | DOI:10.1111/nph.15053


  1. Y. Takaoka, M. Ueda, Enantiodifferential approach for the target protein detection of the jasmonate glucoside that controls the leaf closure of Samanea saman in `Plant Chemical Genomics`, Friedrich Fauser and Martin Jonikas (Eds), (‘Methods in Molecular Biology’ Vol.1795), Springer Nature, in press (2018).


  1. 田村 理、岡田麻衣子、上田 実、「強心性配糖体アグリコン ウアバインの新規生理活性」、化学と生物(遠藤 章先生ガードナー賞受賞記念特集号)、56、p.184-189 (2018).



2017


  1. M. Ueda, S. Egoshi, K. Dodo, Y. Ishimaru, H. Yamakoshi, T. Nakano, Y. Takaoka, S. Tsukiji, M. Sodeoka, Non-canonical function of a small-molecular virulence factor coronatine against plant immunity: An In vivo Raman imaging approach, ACS Central Science, 3, 462-472 (2017). DOI: 10.1021/acscentsci.7b00099


  1. Y. Takaoka, Y. Nukadzuka, M. Ueda, Reactive group-embedded affinity labeling reagent for efficient intracellular protein labeling, Bioorg. Med. Chem. (invited paper), 25, 2888-2894 (2017).


  1. Y. Takaoka, M. Imai, M. Shigenaga, M. Ueda, Design and synthesis of a second-generation ligand-tethered calcium indicator for plant cell biology based on the fundamental analyses of the structure and physical property, Tetrahedron, 73, 3079-3085 (2017).


  1. Y. Ishimaru, T. Oikawa, T. Suzuki, H. Matsuura, K. Takahashi, S. Takeishi, S. Hamamoto, N. Uozumi, T. Shimizu, M. Seo, H. Ohta, M. Ueda, GTR1 is a jasmonic acid and jasmonoyl-L-isoleucine transporter in Arabidopsis thaliana, Biosci. Biotechnol. Biochem., 81, 249-255 (2017). Selected as a cover picture.


  1. Y. Ishimaru, K. Washiyama, T. Oikawa, S. Hamamoto, N. Uozumi, and M. Ueda, Dimerization of GTR1 regulates their plasmamembrane localization, Plant Signal. Behav., 12, - (2017).


  1. H. Oishi, Y. Takaoka, T. Nishimaki-Mogami, H. Saito, M. Ueda, A Novel Nuclear Receptor Ligand, Digoxigenin, is a Selective Antagonist of Liver-X-receptors, Chem. Lett., 46, 313-314 (2017).


  1. N. Shinohara, N. Sunagawa, S. Tamura, R. Yokoyama, M. Ueda, K. Igarashi, K. Nishitani, The plant cell-wall enzyme AtXTH3 catalyses covalent cross-linking between cellulose and cello- oligosaccharide. Sci. Rep. 7, 46099; doi: 10.1038/srep46099 (2017). Selected as an F1000 article.

 

 

2016


  1. Y. Kanno, T. Oikawa, Y. Chiba, Y. Ishimaru, T. Shimizu, N. Sano, T. Koshiba, Y. Kamiya, M. Ueda, M. Seo, AtSWEET13 and AtSWEET14 regulate gibberellin-mediated physiological processes, Nature Commun. 7:13245 | DOI: 10.1038/ncomms13245 (2016).Selected as an F1000 article.


  1. S. Egoshi, Y. Takaoka, H. Saito, Y. Nukadzuka, K. Hayashi, Y. Ishimaru, H. Yamakoshi, K. Dodo, M. Sodeoka, M. Ueda, Dual function of coronatine as a bacterial virulence factor against plant: possible COI1-JAZ-independent role, RSC Adv., 6, 19404-19412 (2016).


  1. Y. Takaoka, M. Shigenaga, Y. Nukadzuka, M. Imai, Y. Ishimaru, K. Saito, R. Yokoyama, K. Nishitani, M. Ueda, Protein Ligand-tethered Synthetic Calcium Indicator for Localization Control and Spatiotemporal Calcium Imaging in Plant Cells, Bioorg. Med. Chem. Lett., 26, 9-14 (2016).


  1. T. Kobayashi, R. Nakanishi Itai, T. Senoura, T. Oikawa, Y. Ishimaru, M. Ueda, H. Nakanishi, N. K. Nishizawa, Jasmonate signaling is activated in the very early stages of iron deficiency responses in rice roots, Plant Mol. Biol., 91, 533-547 (2016).


  1. 上田 実、「生物の謎に挑む天然物ケミカルバイオロジー」、化学工業(特集 ケミカルバイオロジーの新展開)、67682-686 (2016).


  1. 上田 実、「ディビジョントピックス 天然物の標的選択性を立体異性体で制御する」、化学と工業、69, 236 (2016).



2015


  1. H. Saito, T. Oikawa, S. Hamamoto, Y. Ishimaru, T. Utsumi, J. Chen, M. Kanamori, Y. Sasaki-Sekimoto, M. Shimojima, S. Masuda, Y. Kamiya, M. Seo, N. Uozumi, M. Ueda, H. Ohta, The jasmonate-responsive GTR1 transporter is required for gibberellin-mediated stamen development in Arabidopsis, Nature Commun. 6: 6095 doi: 10.1038/ncomms7095 (2015).


  1. M. Ueda, G. Yang, Y. Nukadzuka, Y. Ishimaru, S. Tamura, Y. Manabe, Functional importance of the sugar moiety of jasmonic acid glucoside for bioactivity and target affinity, Org. Biomol. Chem., 13, 55-58 (2015).


  1. K. Kurotani, K. Hayashi, S. Hatanaka, Y. Toda, D. Ogawa, H. Ichikawa, Y. Ishimaru, R. Tashita, T. Suzuki, M. Ueda, T. Hattori, S. Takeda, Elevated levels of CYP94 family gene expression alleviate the jasmonate response and enhance salt tolerance in rice, Plant Cell Physiol., 56, 779-789 (2015).


  1. K. Bashir, Y. Ishimaru, R. Nakanishi Itai, T. Senoura, M. Takahashi, G. An, T. Oikawa, M. Ueda, A. Sato, N. Uozumi, H. Nakanishi, and N. K Nishizawa, Iron deficiency regulated OsOPT7 is essential for iron homeostasis in rice, Plant Mol. Biol., 88, 165-176 (2015).


  1. 上田 実、「植物の運動を引き起こす化学物質」、現代化学、印刷中 (2015).


  1. 上田 実、「生理活性天然物の作用メカニズム」、生体の科学[特集]使える最新ケミカルバイオロジー、66151-155 (2015).


  1. 上田 実編著、「CSJカレントレビュー19 生物活性分子のケミカルバイオロジー:標的同定と作用機構(書籍)」、化学同人 (2015):上田執筆分「第2章 生物活性リガンド分子標的の基礎」、「第15章 ”Glycosylation Switching”による内因性リガンドの活性制御」


  1. 上田 実、「植物の不思議と化学物質」、河北新報、2015年3月10日から15日(連載).



これ以前の主要論文


  1. Y. Nakamura, A. Mithöfer, E. Kombrink, W. Boland, S. Hamamoto, N. Uozumi, K. Tohma, M. Ueda, 12-Hydroxyjasmonic Acid Glucoside is a COI1-JAZs Independent Activator of Leaf Closing Movement in Samanea saman, Plant Physiol., 155, 1226-1236 (2011).


  1. M. Ueda, Y. Manabe, Y. Otsuka, N. Kanzawa, Cassia occidentalis MetE as a cytosolic target for potassium isolespedezate, a leaf-opening factor of Cassia plants: target exploration by compact molecular probe (CMP) strategy, Chem. Asian J., 6, 3287-3297 (2011). VIP & Front cover picture.


  1. M. Ueda, T. Tokunaga, M. Okada, Y. Nakamura, N. Takada, R. Suzuki, K. Kondo, Trap-closing Chemical Factors of Venus’s Flytrap, ChemBioChem, 11, 2378-2383 (2010).


  1. M. Okada, S. Park, T. Koshizawa, M. Ueda, (R)-Eucomic Acid, a Leaf-opening Factor of the Model Organism, Lotus japonicus, Tetrahedron, 65, 2136-2141 (2009).


  1. Y. Nakamura, R. Miyatake, M. Ueda, Enantiodifferential Approach for the Detection of the Target Membrane Protein of the Jasmonate Glycoside That Controls the Leaf Movement of Albizzia saman, Angew. Chem. Int. Ed., 47, 7289-7292 (2008).



 Reviews

  1. M. Ueda, Chemical Biology of Natural Products on the Basis of Identification of Target Proteins (Highlight Review), Chem. Lett., 41, 658-666 (2012).


  1. M. Ueda and Y. Nakamura, Chemical basis of plant leaf movement, Plant Cell Physiology (Mini review), 48, 900-907 (2007).


  1. M. Ueda, Y. Nakamura, Metabolites involved in plant movement and ‘memory’: Nyctinasty of legumes and trap movement in the Venus’ flytrap, Natural Product Reports, 23, 548-557 (2006).


  1. M. Ueda, S. Yamamura, The Chemistry and Biology of the Plant Leaf-movements, Angew. Chem. Int. Ed., 39, 1400-1414 (2000).





学術論文、総説、解説記事